PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A4KG4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 237aa    MW: 27191.4 Da    PI: 4.4984
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A4KG4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.75.1e-07652855
          AP2  8 wdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++++gr++A+++d  ++n  ++     g+  t eeAa a++ a+ +++g
  Aradu.A4KG4  6 RHRWTGRYEAHLWDkNCWNEsQN---KKGRQATQEEAATAYDMAAIEYRG 52
                 6999**********888876444...44888999**************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.287160IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-9662IPR016177DNA-binding domain
SMARTSM003806.6E-9666IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.4E-9661IPR001471AP2/ERF domain
CDDcd000181.41E-11662No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MAVLPRHRWT GRYEAHLWDK NCWNESQNKK GRQATQEEAA TAYDMAAIEY RGLNAVTNFD  60
LSRYIKWLKP NNNSNENDHN NNNNNNRISF NLAAAVAVDY VNPNCNNTNF TPNFNNNSLF  120
NHEPLFINNN NIDNNNNNGS KLGQARPGAT SALELLLQSS KFKEMMEMTS SVANNNNNNP  180
STPAECSDEL PQCNFPDDIQ TYFEYEDSNK YEEGDHDTLF NEIHSFVPMF HCDDFEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935090.11e-111PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLV7C9J22e-64V7C9J2_PHAVU; Uncharacterized protein
STRINGGLYMA06G30840.22e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.12e-18AP2 family protein